CDS

Accession Number TCMCG066C11190
gbkey CDS
Protein Id XP_034584049.1
Location complement(join(9835824..9836783,9836960..9837092,9837203..9837336,9837520..9837609,9837683..9837869,9838011..9838072,9838169..9838331,9838816..9838859,9838951..9839106,9839196..9839243,9839680..9840153))
Gene LOC117847022
GeneID 117847022
Organism Setaria viridis

Protein

Length 816aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034728158.1
Definition pre-rRNA 2'-O-ribose RNA methyltransferase [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14857        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000463        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008171        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008650        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016435        [VIEW IN EMBL-EBI]
GO:0016436        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030687        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAAGGCGAAGGGGAAGAGCCGGCAGGACAAGTTCTACCACCTCGCCAAGGAGCAAGGGTACCGGAGTCGCGCGGCCTTCAAGCTGCTCCAGCTCGACGCGCGGTTCCGCTTCCTCCCGACGGCGCGCTCGGTGCTCGACCTCTGCGCCGCGCCGGGAGGGTGGGTCCAGGTGGCCGTCAACCATGCCCCCGTGGGAGCCTTCGTCGTGGGCGTCGACCTCGTGCCCATCCGCCCCATCCGCGGCGCCCACTCGCTCACCGAGGACATCACCACCACCAAGTGCCGCGCCGCGGTGCGGAGGCTGATGGACGCTAACGGCGTCTCCGCGTTCGACGTCGTGCTCCACGACGGGTCACCCAACGTCGGTGGTGCCTGGGCGCAGGAAGCCACATCGCAGTCGGCGCTGGTCATCGACGCCCTGCGCCTCGCTACAATGTTCCTCGCCCCCAAGGGTGCCTTTATCACCAAGGTTTTTAGGTCTCAAGATTACAACGCTATTATGTACTGTCTTAAACAGTTCTTTGAGAAGGTTGAGGCAACTAAACCTACAGCAAGTCGGTCTACATCTGCTGAAATTTATATCATCTGCCTGAAATATAAGGCTCCCGCAAAGATTCAACCAGAACTCCTTGATATAAAGCACTTGTTCAGTGTGGTTCCGGATACGAATAAATCTAGGGATGTTATGGATGGTAGGCACAAGAGACATCGTGATGGGTATGAAGAAGGGAATACAACATTGCGGAAAGTCGGTTTGGCATCAGACTTTATATGGTCTGATGCCCAGACACCACTGGAGTTTTTGGGCTCTTACAATGCGATTTCATTTGATAATCCAGAATCTCTGCCCATAAAGAATCATGAGCTTACTAATGATGATATAAAAAATTTCTGTGAGGATTTACTTCTGTTGGATAAAAATAGTTTCAAGCATATCTTGAAATGGCGGATCCGCTTACGCAAAGCACTGGCTTCGTCATCACAAATCACCCCAAAGGTTGATGATGATGCAGAGACCACAAAGGTCAAGGATGATGATCAACTTCTCCAAGAGATGGAAGAATTGACAAGTGTTATTGATAGGAATAAAAGGAGAGAGAAAAAGCGCCTGTCAAAGCGTCGAGCAAAGGATAAAGCACGCAAGGCTACAGGAATGCAGATTGACGCTACAGGAGATGATTACGGTGATCCTGACTTGTTTTCTATCAGTGTTATCAAGGGTGGAAAAGAACTTCAAGCTGTTGAATCAGCAGAGCTTGATGTGGAAGATGACATTGAAGACAGTGAGAATGAGGAAACTCAAGCTCGTGAAGTCTCTGATGAGGACATGGATTCTGATGAAGAACAACAGAGGTACGATGCACAGCTTGAGGAGATGCTTGATGAAGCTTATGAGCGCTTTGTAACGAAAAAGGGTGGTGAAGTAAAACAAGAACGTAAGCGTGCAAAGCGAATCAATCCTGATGCTGATGCTGACTTGTTAGAGGGTAGTGAAGATGATGGTGATGACGTTGAAATGGATCAAGGTTTTGACGACGATCAAGATCCGGAGACCAATCCCCTTCTATTATCGCTAGATGAACACAAACCAACTAAAGAGCAGATTGTACAACAGTGGTACAGTCAGGATGTGTTCGCAGAAGCAGGAACAGACGCCGCTGAGCAGAGTGACAGTGAAGATGAAAGGGAGAATTTGCAGAGGAATATGGAAAAGAAGATGGACACTGGCAAAAAGGAAAAGATGGCTAAGGCACAGCATTTGCAACAAGATGATTTTGATATCGTACCTGCAGAACCAGTCCGAAATGAAGAGGATTCATCTTCATCTTCTGATGAATCAGATGAATCGGAGGAGGATCTCAATGATTACAGAAAGGCTGAAGTACTAGCCTATGCAAAGAAGATGTTGAGGAAGAAGCAGAGGGAGCAGATACTTGATGATGCTTACAACAAGTACATGTTTGATGATGAAGGGTTACCCAATTGGTTTGTTGAGGATGAGAAGAGGCATAGCCAGCCCATGAAGCCTGTTACACGTGAAGAAGTAGCTGCCATGAGGGCGCAGTTTAAGGAGATTGATGCCCGTCCATCCAAGAAGGTTGCAGAGGCCAAGGCGCGGAAGAAGCGTGTTGCCATGAAGAAACTGGACAGTGCACGCCAAAAGGCAGATGCCGTCGCAGACCAGAATGACATAAACGAGCGGTCGAAGAGGAAGATGATTGACCAGATTTACAGGAAGGCAATGCCCAAGAAGCCTCAGAAGGAGTACGTGGTTGCAAAGAAGGGGGTTCAGGTTAGGACCGGCAAAGGGAAGGTATTGGTGGATCCACGGATGAAGAAGGACAAGAGGGCCAGTGGGACTGGGAAGAAAGGGAAGAAGGGCGGCAAAGGTGCTAAAGGGAAGGGTGGCCAGAGAGGGAAGAAGGCTGGGAAAGCTCCGAGGTAA
Protein:  
MGKAKGKSRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARSVLDLCAAPGGWVQVAVNHAPVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDANGVSAFDVVLHDGSPNVGGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQFFEKVEATKPTASRSTSAEIYIICLKYKAPAKIQPELLDIKHLFSVVPDTNKSRDVMDGRHKRHRDGYEEGNTTLRKVGLASDFIWSDAQTPLEFLGSYNAISFDNPESLPIKNHELTNDDIKNFCEDLLLLDKNSFKHILKWRIRLRKALASSSQITPKVDDDAETTKVKDDDQLLQEMEELTSVIDRNKRREKKRLSKRRAKDKARKATGMQIDATGDDYGDPDLFSISVIKGGKELQAVESAELDVEDDIEDSENEETQAREVSDEDMDSDEEQQRYDAQLEEMLDEAYERFVTKKGGEVKQERKRAKRINPDADADLLEGSEDDGDDVEMDQGFDDDQDPETNPLLLSLDEHKPTKEQIVQQWYSQDVFAEAGTDAAEQSDSEDERENLQRNMEKKMDTGKKEKMAKAQHLQQDDFDIVPAEPVRNEEDSSSSSDESDESEEDLNDYRKAEVLAYAKKMLRKKQREQILDDAYNKYMFDDEGLPNWFVEDEKRHSQPMKPVTREEVAAMRAQFKEIDARPSKKVAEAKARKKRVAMKKLDSARQKADAVADQNDINERSKRKMIDQIYRKAMPKKPQKEYVVAKKGVQVRTGKGKVLVDPRMKKDKRASGTGKKGKKGGKGAKGKGGQRGKKAGKAPR